Institute of Aquaculture

Outputs related to Institute of Aquaculture

Showing 501 to 600 of 3020

Article

Guo H, Chen C, Yan X, Li Y, Wen X, You C, Monroig Ó, Tocher DR & Wang S (2021) Effects of different dietary oil sources on growth performance, antioxidant capacity and lipid deposition of juvenile golden pompano Trachinotus ovatus. Aquaculture, 530, Art. No.: 735923. https://doi.org/10.1016/j.aquaculture.2020.735923


Article

Vogeler S, Carboni S, Li X, Ireland JH, Miller-Ezzy P & Joyce A (2021) Cloning and characterisation of NMDA receptors in the Pacific oyster, Crassostrea gigas (Thunberg, 1793) in relation to metamorphosis and catecholamine synthesis. Developmental Biology, 469, pp. 144-159. https://doi.org/10.1016/j.ydbio.2020.10.008


Article

Woldemariam NT, Agafonov O, Sindre H, Høyheim B, Houston RD, Robledo D, Bron JE & Andreassen R (2020) miRNAs Predicted to Regulate Host Anti-viral Gene Pathways in IPNV-Challenged Atlantic Salmon Fry Are Affected by Viral Load, and Associated With the Major IPN Resistance QTL Genotypes in Late Infection. Frontiers in Immunology, 11, Art. No.: 2113. https://doi.org/10.3389/fimmu.2020.02113


Article

Ramirez-Paredes JG, Verner-Jeffreys D, Papadopoulou A, Monaghan SJ, Smith L, Haydon D, Wallis TS, Davie A, Adams A & Migaud H (2020) A commercial autogenous injection vaccine protects ballan wrasse (Labrus bergylta, ascanius) against aeromonas salmonicida vapA type V. Fish and Shellfish Immunology, 107 (Part A), pp. 43-53. https://doi.org/10.1016/j.fsi.2020.09.040


Article

Coyle NM, Bartie KL, Bayliss SC, Bekaert M, Adams A, McMillan S, Verner-Jeffreys DW, Desbois AP & Feil EJ (2020) A Hopeful Sea-Monster: A Very Large Homologous Recombination Event Impacting the Core Genome of the Marine Pathogen Vibrio anguillarum. Frontiers in Microbiology, 11, Art. No.: 1430. https://doi.org/10.3389/fmicb.2020.01430


Article

Foster G, Baily JL, Howie F, Brownlow AC, Wagenaar JA, Gilbert MJ, Miller WG, Byrne BA, Clothier KA, Schmitt T, Patterson T, Reid RJ & Dagleish MP (2020) Campylobacter pinnipediorum subsp. caledonicus and C. pinnipediorum subsp. pinnipediorum recovered from abscesses in pinnipeds. Diseases of Aquatic Organisms, 142, pp. 41-46. https://doi.org/10.3354/dao03544


Article

Huyben D, Roehe BK, Bekaert M, Ruyter B & Glencross B (2020) Dietary Lipid:Protein Ratio and n-3 Long-Chain Polyunsaturated Fatty Acids Alters the Gut Microbiome of Atlantic Salmon Under Hypoxic and Normoxic Conditions. Frontiers in Microbiology, 11, Art. No.: 589898. https://doi.org/10.3389/fmicb.2020.589898


Article

Jin X, Morro B, Tørresen OK, Moiche V, Solbakken MH, Jakobsen KS, Jentoft S & MacKenzie S (2020) Innovation in Nucleotide-Binding Oligomerization-Like Receptor and Toll-Like Receptor Sensing Drives the Major Histocompatibility Complex-II Free Atlantic Cod Immune System. Frontiers in Immunology, 11, Art. No.: 609456. https://doi.org/10.3389/fimmu.2020.609456


Book Chapter

Lopez-Jimena B, Bakheit M, Bekaert M, Harold G, Frischmann S, Fall C, Diagne CT, Faye O, Faye O, Sall AA & Weidmann M (2020) Development and Validation of Real-Time RT-LAMP Assays for the Specific Detection of Zika Virus. In: Kobinger G & Racine T (eds.) Zika Virus: Methods and Protocols. Methods in Molecular Biology, 2142. New York: Springer, pp. 147-164. https://doi.org/10.1007/978-1-0716-0581-3_13


Book Chapter

Diagne CT, Faye M, Lopez-Jimena B, Abd El Wahed A, Loucoubar C, Fall C, Mencatelli G, Faye O, Faye O, Weidmann M & Sall AA (2020) Comparative Analysis of Zika Virus Detection by RT-qPCR, RT-LAMP, and RT-RPA. In: Kobinger G & Racine T (eds.) Zika Virus: Methods and Protocols. Methods in Molecular Biology, 2142. New York: Springer, pp. 165-179. https://doi.org/10.1007/978-1-0716-0581-3_14


Book Chapter

Hansen S, Faye O, Sanabani SS, Faye M, Böhlken-Fascher S, Faye O, Sall AA, Bekaert M, Weidmann M, Czerny C & Abd El Wahed A (2020) Zika Virus Amplification Using Strand Displacement Isothermal Method and Sequencing Using Nanopore Technology. In: Kobinger G & Racin T (eds.) Zika Virus: Methods and Protocols. Methods in Molecular Biology, 2142. New York: Springer, pp. 123-136. https://doi.org/10.1007/978-1-0716-0581-3_11


Article

Ramirez-Paredes JG, Larsson P, Thompson KD, Penman DJ, Busse H, Ohrman C, Sjodin A, Soto E, Richards RH, Adams A & Colquhoun DJ (2020) Reclassification of Francisella noatunensis subsp. orientalis Ottem et al. 2009 as Francisella orientalis sp. nov., Francisella noatunensis subsp. chilensis subsp. nov. and emended description of Francisella noatunensis. International Journal of Systematic and Evolutionary Microbiology, 70 (3), p. 2034–2048. https://doi.org/10.1099/ijsem.0.004009


Article

Zhou S, Tu X, Pang H, Hoare R, Monaghan SJ, Luo J & Jian J (2020) A T3SS Regulator Mutant of Vibrio alginolyticus Affects Antibiotic Susceptibilities and Provides Significant Protection to Danio rerio as a Live Attenuated Vaccine. Frontiers in Cellular and Infection Microbiology, 10, Art. No.: 183. https://doi.org/10.3389/fcimb.2020.00183


Article

Ott D, Ulrich K, Ginsbach P, Öhme R, Bock-Hensley O, Falk U, Teinert M & Lenhard T (2020) Tick-borne encephalitis virus (TBEV) prevalence in field-collected ticks (Ixodes ricinus) and phylogenetic, structural and virulence analysis in a TBE high-risk endemic area in southwestern Germany. Parasites and Vectors, 13, Art. No.: 303. https://doi.org/10.1186/s13071-020-04146-7


Book Chapter

Faye O, Diagne CT, Diallo A, Meyer E, Soropogui B, Fall G, Fall C, Magassouba N, Koivogui L, Keita S, Loucoubar C, Diop M, Weidmann M, Faye O & Sall AA (2020) Molecular Diagnostics of Ebola Patient Samples by Institut Pasteur de Dakar Mobile Laboratory in Guinea 2014-2016. In: Okware SI (ed.) Re-emerging Filovirus Diseases. London: InTech, pp. 71-81. https://doi.org/10.5772/intechopen.88263


Book Chapter

Collins C, Bresnan E, Brown L, Falconer L, Guilder J, Jones L, Kennerley A, Malham S, Murray A & Stanley M (2020) Impacts of climate change on aquaculture. In: MCCIP Science Review 2020. Lowestoft: Marine Climate Change Impacts, p. 482–520. http://archive.mccip.org.uk/media/2031/21_aquaculture_2020.pdf; https://doi.org/10.14465/2020.arc21.aqu


Article

AmbuAli A, Monaghan SJ, McLean K, Inglis NF, Bekaert M, Wehner S & Bron JE (2020) Identification of proteins from the secretory/excretory products (SEPs) of the branchiuran ectoparasite Argulus foliaceus (Linnaeus, 1758) reveals unique secreted proteins amongst haematophagous ecdysozoa. Parasites and Vectors, 13 (1), Art. No.: 88. https://doi.org/10.1186/s13071-020-3964-z


Article

Umasuthan N, Xue X, Caballero-Solares A, Kumar S, Westcott JD, Chen Z, Fast MD, Skugor S, Nowak BF, Rise ML & Taylor RG (2020) Transcriptomic Profiling in Fins of Atlantic Salmon Parasitized with Sea Lice: Evidence for an Early Imbalance Between Chalimus-Induced Immunomodulation and the Host’s Defense Response. International Journal of Molecular Sciences, 21 (7), p. 2417. https://doi.org/10.3390/ijms21072417


Article

Katan T, Xue X, Caballero-Solares A, Taylor RG, Rise ML & Parrish CC (2020) Influence of Dietary Long-Chain Polyunsaturated Fatty Acids and ω6 to ω3 Ratios on Head Kidney Lipid Composition and Expression of Fatty Acid and Eicosanoid Metabolism Genes in Atlantic Salmon (Salmo salar). Frontiers in Molecular Biosciences, 7. https://doi.org/10.3389/fmolb.2020.602587


Article

Elbialy ZI, Atiba A, Abdelnaby A, Al-Hawary II, Elsheshtawy A, El-Serehy HA, Abdel-Daim MM, Fadl SE & Assar DH (2020) Collagen extract obtained from Nile tilapia (Oreochromis niloticus L.) skin accelerates wound healing in rat model via up regulating VEGF, bFGF, and α-SMA genes expression. BMC Veterinary Research, 16 (1), Art. No.: 352. https://doi.org/10.1186/s12917-020-02566-2


Article

Chen C, Zhang M, Li Y, Wang S, Xie D, Wen X, Hu Y, Shen J, He X, You C, Tocher DR & Monroig Ó (2020) Identification of miR-145 as a Key Regulator Involved in LC-PUFA Biosynthesis by Targeting hnf4α in the Marine Teleost Siganus canaliculatus. Journal of Agricultural and Food Chemistry, 68 (51), pp. 15123-15133. https://doi.org/10.1021/acs.jafc.0c04649


Article

Leclercq E, Pontefract N, Rawling M, Valdenegro V, Aasum E, Andujar LV, Migaud H, Castex M & Merrifield D (2020) Dietary supplementation with a specific mannan-rich yeast parietal fraction enhances the gut and skin mucosal barriers of Atlantic salmon (Salmo salar) and reduces its susceptibility to sea lice (Lepeophtheirus salmonis). Aquaculture, 529, Art. No.: 735701. https://doi.org/10.1016/j.aquaculture.2020.735701


Article

Legario F, Choresca Jr CH, Turnbull JF & Crumlish M (2020) Isolation and Molecular Characterization of Streptococcal Species recovered from Clinical Infections in Farmed Nile Tilapia (Oreochromis niloticus) in the Philippines. Journal of Fish Diseases, 43 (11), pp. 1431-1442. https://doi.org/10.1111/jfd.13247


Article

Fernandez‐Senac C, Fridman S, Sokolowska J, Monaghan SJ, Garzon T, Betancor M, Paladini G, Adams A & Bron JE (2020) A comparison of the use of different swab materials for optimal diagnosis of amoebic gill disease (AGD) in Atlantic salmon (Salmo salar L.). Journal of Fish Diseases, 43 (11), pp. 1463-1472. https://doi.org/10.1111/jfd.13243


Article

Vera LM, Hamre K, Espe M, Hemre G, Skjærven K, Lock E, Prabhu AJ, Leeming D, Migaud H, Tocher DR & Taylor JF (2020) Higher dietary micronutrients are required to maintain optimal performance of Atlantic salmon (Salmo salar) fed a high plant material diet during the full production cycle. Aquaculture, 528, Art. No.: 735551. https://doi.org/10.1016/j.aquaculture.2020.735551


Article

Shi B, Jin M, Jiao L, Betancor MB, Tocher DR & Zhou Q (2020) Effects of dietary zinc level on growth performance, lipolysis and expression of genes involved in the calcium/calmodulin-dependent protein kinase kinase-β/AMP-activated protein kinase pathway in juvenile Pacific white shrimp. British Journal of Nutrition, 124 (8), pp. 773-784. https://doi.org/10.1017/s0007114520001725


Article

Luo J, Zhu T, Jin M, Cheng X, Yuan Y, Wang X, Lu J, Jiao L, Tocher DR & Zhou Q (2020) Influence of dietary zinc on growth, zinc bioaccumulation and expression of genes involved in antioxidant and innate immune in juvenile mud crabs (Scylla paramamosain). British Journal of Nutrition, 124 (7), pp. 681-692. https://doi.org/10.1017/s0007114520001531


Conference Paper (published)

Carmichael AFB, Bhowmik D, Baily J, Brownlow A, Gunn GJ & Reeves A (2020) Ir-Man: An Information Retrieval Framework for Marine Animal Necropsy Analysis. In: BCB '20: Proceedings of the 11th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics. 11th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB 2020), Virtual, 21.09.2020-24.09.2020. New York: ACM, p. 67. https://doi.org/10.1145/3388440.3412417


Article

Broughton R, Tocher DR & Betancor MB (2020) Development of a C18 Supercritical Fluid Chromatography-Tandem Mass Spectrometry Methodology for the Analysis of Very-Long-Chain Polyunsaturated Fatty Acid Lipid Matrices and Its Application to Fish Oil Substitutes Derived from Genetically Modified Oilseeds in the Aquaculture Sector. ACS Omega, 5 (35), pp. 22289-22298. https://doi.org/10.1021/acsomega.0c02631


Article

Jin M, Zhu T, Tocher D, Luo J, Shen Y, Li X, Pan T, Yuan Y, Betancor M, Jiao L, Sun P & Zhou Q (2020) Dietary fenofibrate attenuated high-fat-diet-induced lipid accumulation and inflammation response partly through regulation of pparα and sirt1 in juvenile black seabream (Acanthopagrus schlegelii). Developmental and Comparative Immunology, 109, Art. No.: 103691. https://doi.org/10.1016/j.dci.2020.103691


Article

Sun J, Chen C, You C, Liu Y, Ma H, Monroig Ó, Tocher DR, Wang S & Li Y (2020) The miR-15/16 Cluster Is Involved in the Regulation of Vertebrate LC-PUFA Biosynthesis by Targeting pparγ as Demonostrated in Rabbitfish Siganus canaliculatus. Marine Biotechnology, 22 (4), p. 475–487. https://doi.org/10.1007/s10126-020-09969-0