Institute of Aquaculture

Outputs related to Institute of Aquaculture

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Book Review

Turnbull J (2021) The Welfare of Fish. Review of: The Welfare of Fish. Edited by TS Kristiansen, A Ferno, MA Pavlidis and H van de Vis (2020). Springer Nature, Heidelberg. 532 pages (ISBN: 978-3030416744). Animal Welfare, 30 (2), pp. 229-230. https://www.ingentaconnect.com/contentone/ufaw/aw/2021/00000030/00000002/art00012#


Article

Rodriguez-Carretero I, Betancor MB, López-Jiménez JA, Esteban MA, Sánchez-Vázquez FJ & López-Olmeda JF (2021) Daily rhythms in the morphometric parameters of hepatocytes and intestine of the European sea bass (Dicentrarchus labrax): influence of feeding time and hepatic zonation. Journal of Comparative Physiology B, 191, pp. 503-515. https://doi.org/10.1007/s00360-020-01334-w


Article

Shi B, Lu J, Hu X, Betancor MB, Zhao M, Tocher DR, Zhou Q, Jiao L, Xu F & Jin M (2021) Dietary copper improves growth and regulates energy generation by mediating lipolysis and autophagy in hepatopancreas of Pacific white shrimp (Litopenaeus vannamei). Aquaculture, 537, Art. No.: 736505. https://doi.org/10.1016/j.aquaculture.2021.736505


Article

Rasid R, Brown JH, Pratoomyot J, Monroig O & Shinn AP (2021) Interaction and effects of graded levels of dietary phytic acid on the moulting performance, whole body mineral composition and availability on the freshwater prawn Macrobrachium rosenbergii. Aquaculture, 537, Art. No.: 736466. https://doi.org/10.1016/j.aquaculture.2021.736466


Article

Mock TS, Francis DS, Jago MK, Miles PC, Glencross BD, Smullen RP, Keast RSJ & Turchini GM (2021) Seasonal effects on growth and product quality in Atlantic salmon fed diets containing terrestrial oils as assessed by a long-term, on-farm growth trial. Aquaculture Nutrition, 27 (2), pp. 477-490. https://doi.org/10.1111/anu.13200


Article

Luo J, Zhang Y, Zhou Q, Betancor MB, Tocher DR, Lu J, Yuan Y, Zhu T, Jiao L, Wang X, Zhao M, Hu X & Jin M (2021) Dietary soybean oil aggravates the adverse effects of low salinity on intestinal health in juvenile mud crab Scylla paramamosain. Ecotoxicology and Environmental Safety, 213, Art. No.: 112004. https://doi.org/10.1016/j.ecoenv.2021.112004


Article

Shi B, Xu F, Zhou Q, Regan MK, Betancor MB, Tocher DR, Sun M, Meng F, Jiao L & Jin M (2021) Dietary organic zinc promotes growth, immune response and antioxidant capacity by modulating zinc signaling in juvenile Pacific white shrimp (Litopenaeus vannamei). Aquaculture Reports, 19, Art. No.: 100638. https://doi.org/10.1016/j.aqrep.2021.100638


Article

Tschesche C, Bekaert M, Bassett DI, Mitchell C, North B, Boyd S, Carmona‐Antoñanzas G, Bron JE & Sturm A (2021) Investigation of deltamethrin resistance in salmon lice (Lepeophtheirus salmonis) provides no evidence for roles of mutations in voltage-gated sodium channels. Pest Management Science, 77 (2), pp. 1052-1060. https://doi.org/10.1002/ps.6120


Article

Mladineo I, Hrabar J, Trumbić Ž, Manousaki T, Tsakogiannis A, Taggart JB & Tsigenopoulos CS (2021) Community Parameters and Genome-Wide RAD-Seq Loci of Ceratothoa oestroides Imply Its Transfer between Farmed European Sea Bass and Wild Farm-Aggregating Fish. Pathogens, 10 (2), Art. No.: 100. https://doi.org/10.3390/pathogens10020100


Article

Dagleish MP, Perri A, Maley M, Ballingall KT, Baily JL, Davison NJ, Brownlow AC & Rocchi MS (2021) Novel Dermatitis and Relative Viral Nucleic Acid Tissue Loads in a Fin Whale (Balaenoptera physalus) with Systemic Cetacean Morbillivirus Infection. Journal of Comparative Pathology, 183, pp. 57-62. https://doi.org/10.1016/j.jcpa.2021.01.005


Article

Amat-Trigo F, Torralva M, González-Silvera D, Martínez-López FJ & Oliva-Paterna FJ (2021) Plasticity in Reproductive Traits, Condition and Energy Allocation of the Non-Native Pyrenean Gudgeon Gobio lozanoi in a Highly Regulated Mediterranean River Basin. Water, 13 (3), Art. No.: 387. https://doi.org/10.3390/w13030387


Article

Wang X, Jin M, Cheng X, Hu X, Zhao M, Yuan Y, Sun P, Jiao L, Betancor M, Tocher D & Zhou Q (2021) Dietary DHA/EPA ratio affects growth, tissue fatty acid profiles and expression of genes involved in lipid metabolism in mud crab Scylla paramamosain supplied with appropriate n-3 LC-PUFA at two lipid levels. Aquaculture, 532, Art. No.: 736028. https://doi.org/10.1016/j.aquaculture.2020.736028


Article

Shi B, Yuan Y, Jin M, Betancor MB, Tocher DR, Jiao L, Song D & Zhou Q (2021) Transcriptomic and physiological analyses of hepatopancreas reveal the key metabolic changes in response to dietary copper level in Pacific white shrimp Litopenaeus vannamei. Aquaculture, 532, Art. No.: 736060. https://doi.org/10.1016/j.aquaculture.2020.736060


Article

Zacarias S, Fegan D, Wangsoontorn S, Yamuen N, Limakom T, Carboni S, Davie A, Metselaar M, Little DC & Shinn AP (2021) Increased robustness of postlarvae and juveniles from non-ablated Pacific whiteleg shrimp, Penaeus vannamei, broodstock post-challenged with pathogenic isolates of Vibrio parahaemolyticus (VpAHPND) and white spot disease (WSD). Aquaculture, 532, Art. No.: 736033. https://doi.org/10.1016/j.aquaculture.2020.736033


Article

Zeng F, Pang H, Chen Y, Zheng H, Li W, Ramanathan S, Hoare R, Monaghan SJ, Lin X & Jian J (2021) First Succinylome Profiling of Vibrio alginolyticus Reveals Key Role of Lysine Succinylation in Cellular Metabolism and Virulence. Frontiers in Cellular and Infection Microbiology, 10, Art. No.: 626574. https://doi.org/10.3389/fcimb.2020.626574


Article

Guo H, Chen C, Yan X, Li Y, Wen X, You C, Monroig Ó, Tocher DR & Wang S (2021) Effects of different dietary oil sources on growth performance, antioxidant capacity and lipid deposition of juvenile golden pompano Trachinotus ovatus. Aquaculture, 530, Art. No.: 735923. https://doi.org/10.1016/j.aquaculture.2020.735923


Article

Vogeler S, Carboni S, Li X, Ireland JH, Miller-Ezzy P & Joyce A (2021) Cloning and characterisation of NMDA receptors in the Pacific oyster, Crassostrea gigas (Thunberg, 1793) in relation to metamorphosis and catecholamine synthesis. Developmental Biology, 469, pp. 144-159. https://doi.org/10.1016/j.ydbio.2020.10.008


Article

Ramirez-Paredes JG, Verner-Jeffreys D, Papadopoulou A, Monaghan SJ, Smith L, Haydon D, Wallis TS, Davie A, Adams A & Migaud H (2020) A commercial autogenous injection vaccine protects ballan wrasse (Labrus bergylta, ascanius) against aeromonas salmonicida vapA type V. Fish and Shellfish Immunology, 107 (Part A), pp. 43-53. https://doi.org/10.1016/j.fsi.2020.09.040


Article

Woldemariam NT, Agafonov O, Sindre H, Høyheim B, Houston RD, Robledo D, Bron JE & Andreassen R (2020) miRNAs Predicted to Regulate Host Anti-viral Gene Pathways in IPNV-Challenged Atlantic Salmon Fry Are Affected by Viral Load, and Associated With the Major IPN Resistance QTL Genotypes in Late Infection. Frontiers in Immunology, 11, Art. No.: 2113. https://doi.org/10.3389/fimmu.2020.02113


Article

Coyle NM, Bartie KL, Bayliss SC, Bekaert M, Adams A, McMillan S, Verner-Jeffreys DW, Desbois AP & Feil EJ (2020) A Hopeful Sea-Monster: A Very Large Homologous Recombination Event Impacting the Core Genome of the Marine Pathogen Vibrio anguillarum. Frontiers in Microbiology, 11, Art. No.: 1430. https://doi.org/10.3389/fmicb.2020.01430


Article

Foster G, Baily JL, Howie F, Brownlow AC, Wagenaar JA, Gilbert MJ, Miller WG, Byrne BA, Clothier KA, Schmitt T, Patterson T, Reid RJ & Dagleish MP (2020) Campylobacter pinnipediorum subsp. caledonicus and C. pinnipediorum subsp. pinnipediorum recovered from abscesses in pinnipeds. Diseases of Aquatic Organisms, 142, pp. 41-46. https://doi.org/10.3354/dao03544


Article

Huyben D, Roehe BK, Bekaert M, Ruyter B & Glencross B (2020) Dietary Lipid:Protein Ratio and n-3 Long-Chain Polyunsaturated Fatty Acids Alters the Gut Microbiome of Atlantic Salmon Under Hypoxic and Normoxic Conditions. Frontiers in Microbiology, 11, Art. No.: 589898. https://doi.org/10.3389/fmicb.2020.589898


Article

Jin X, Morro B, Tørresen OK, Moiche V, Solbakken MH, Jakobsen KS, Jentoft S & MacKenzie S (2020) Innovation in Nucleotide-Binding Oligomerization-Like Receptor and Toll-Like Receptor Sensing Drives the Major Histocompatibility Complex-II Free Atlantic Cod Immune System. Frontiers in Immunology, 11, Art. No.: 609456. https://doi.org/10.3389/fimmu.2020.609456


Book Chapter

Lopez-Jimena B, Bakheit M, Bekaert M, Harold G, Frischmann S, Fall C, Diagne CT, Faye O, Faye O, Sall AA & Weidmann M (2020) Development and Validation of Real-Time RT-LAMP Assays for the Specific Detection of Zika Virus. In: Kobinger G & Racine T (eds.) Zika Virus: Methods and Protocols. Methods in Molecular Biology, 2142. New York: Springer, pp. 147-164. https://doi.org/10.1007/978-1-0716-0581-3_13


Book Chapter

Diagne CT, Faye M, Lopez-Jimena B, Abd El Wahed A, Loucoubar C, Fall C, Mencatelli G, Faye O, Faye O, Weidmann M & Sall AA (2020) Comparative Analysis of Zika Virus Detection by RT-qPCR, RT-LAMP, and RT-RPA. In: Kobinger G & Racine T (eds.) Zika Virus: Methods and Protocols. Methods in Molecular Biology, 2142. New York: Springer, pp. 165-179. https://doi.org/10.1007/978-1-0716-0581-3_14


Article

Zhou S, Tu X, Pang H, Hoare R, Monaghan SJ, Luo J & Jian J (2020) A T3SS Regulator Mutant of Vibrio alginolyticus Affects Antibiotic Susceptibilities and Provides Significant Protection to Danio rerio as a Live Attenuated Vaccine. Frontiers in Cellular and Infection Microbiology, 10, Art. No.: 183. https://doi.org/10.3389/fcimb.2020.00183


Article

Ramirez-Paredes JG, Larsson P, Thompson KD, Penman DJ, Busse H, Ohrman C, Sjodin A, Soto E, Richards RH, Adams A & Colquhoun DJ (2020) Reclassification of Francisella noatunensis subsp. orientalis Ottem et al. 2009 as Francisella orientalis sp. nov., Francisella noatunensis subsp. chilensis subsp. nov. and emended description of Francisella noatunensis. International Journal of Systematic and Evolutionary Microbiology, 70 (3), p. 2034–2048. https://doi.org/10.1099/ijsem.0.004009


Article

Ott D, Ulrich K, Ginsbach P, Öhme R, Bock-Hensley O, Falk U, Teinert M & Lenhard T (2020) Tick-borne encephalitis virus (TBEV) prevalence in field-collected ticks (Ixodes ricinus) and phylogenetic, structural and virulence analysis in a TBE high-risk endemic area in southwestern Germany. Parasites and Vectors, 13, Art. No.: 303. https://doi.org/10.1186/s13071-020-04146-7


Book Chapter

Hansen S, Faye O, Sanabani SS, Faye M, Böhlken-Fascher S, Faye O, Sall AA, Bekaert M, Weidmann M, Czerny C & Abd El Wahed A (2020) Zika Virus Amplification Using Strand Displacement Isothermal Method and Sequencing Using Nanopore Technology. In: Kobinger G & Racin T (eds.) Zika Virus: Methods and Protocols. Methods in Molecular Biology, 2142. New York: Springer, pp. 123-136. https://doi.org/10.1007/978-1-0716-0581-3_11


Book Chapter

Faye O, Diagne CT, Diallo A, Meyer E, Soropogui B, Fall G, Fall C, Magassouba N, Koivogui L, Keita S, Loucoubar C, Diop M, Weidmann M, Faye O & Sall AA (2020) Molecular Diagnostics of Ebola Patient Samples by Institut Pasteur de Dakar Mobile Laboratory in Guinea 2014-2016. In: Okware SI (ed.) Re-emerging Filovirus Diseases. London: InTech, pp. 71-81. https://doi.org/10.5772/intechopen.88263


Book Chapter

Collins C, Bresnan E, Brown L, Falconer L, Guilder J, Jones L, Kennerley A, Malham S, Murray A & Stanley M (2020) Impacts of climate change on aquaculture. In: MCCIP Science Review 2020. Lowestoft: Marine Climate Change Impacts, p. 482–520. http://archive.mccip.org.uk/media/2031/21_aquaculture_2020.pdf; https://doi.org/10.14465/2020.arc21.aqu


Article

AmbuAli A, Monaghan SJ, McLean K, Inglis NF, Bekaert M, Wehner S & Bron JE (2020) Identification of proteins from the secretory/excretory products (SEPs) of the branchiuran ectoparasite Argulus foliaceus (Linnaeus, 1758) reveals unique secreted proteins amongst haematophagous ecdysozoa. Parasites and Vectors, 13 (1), Art. No.: 88. https://doi.org/10.1186/s13071-020-3964-z