Article
Whole genome sequences of 234 indigenous African chickens from Ethiopia
Gheyas A, Vallejo-Trujillo A, Kebede A, Dessie T, Hanotte O & Smith J (2022) Whole genome sequences of 234 indigenous African chickens from Ethiopia. Scientific Data, 9 (1), Art. No.: 53. https://doi.org/10.1038/s41597-022-01129-4
Article
Implication of adipocytes from subcutaneous adipose tissue and fatty
Carlos Campos-Sánchez J, Gonzalez-Silvera D, Gong X, Broughton R, Guardiola FA, Betancor MB & Ángeles M (2022) Implication of adipocytes from subcutaneous adipose tissue and fatty. Fish and Shellfish Immunology, 131, pp. 160-171. https://doi.org/10.1016/j.fsi.2022.09.066
Article
Gebru G, Belay G, Vallejo-Trujillo A, Dessie T, Gheyas A & Hanotte O (2022) Ecological niche modelling as a tool to identify candidate indigenous chicken ecotypes of Tigray (Ethiopia). Frontiers in Genetics, 13, Art. No.: 968961. https://doi.org/10.3389/fgene.2022.968961
Article
CAPOT: A flexible rapid assessment model to estimate local deposition of fish cage farm wastes
Telfer TC, Bostock J, Oliver RLA, Corner RA & Falconer L (2022) CAPOT: A flexible rapid assessment model to estimate local deposition of fish cage farm wastes. Marine Environmental Research, 182, Art. No.: 105788. https://doi.org/10.1016/j.marenvres.2022.105788
Article
Vallejo-Trujillo A, Kebede A, Lozano-Jaramillo M, Dessie T, Smith J, Hanotte O & Gheyas A (2022) Ecological niche modelling for delineating livestock ecotypes and exploring environmental genomic adaptation: the example of Ethiopian village chicken. Frontiers in Ecology and Evolution, 10, Art. No.: 866587. https://doi.org/10.3389/fevo.2022.866587
Gheyas AA, Rachman M, Bamidele O, Dessie T, Smith J & Hanotte O (2022) 422. Whole genome sequencing reveals genetic diversity and heat-stress adaptation in Nigerian indigenous chickens in "Society - genetics in the tropics". In: Veerkamp RF & de Haas Y (eds.) Proceedings of 12th World Congress on Genetics Applied to Livestock Production (WCGALP). WCGALP 2022, Rotterdam, 03.07.2022-08.07.2022. Leiden: Brill, pp. 1757-1760. https://doi.org/10.3920/9789086869404_023
Article
Predictive biophysical models of bivalve larvae dispersal in Scotland
Corrochano-Fraile A, Adams TP, Aleynik D, Bekaert M & Carboni S (2022) Predictive biophysical models of bivalve larvae dispersal in Scotland. Frontiers in Marine Science, 9, Art. No.: 85748. https://doi.org/10.3389/fmars.2022.985748
Article
Emam M, Caballero-Solares A, Xue X, Umasuthan N, Milligan B, Taylor RG, Balder R & Rise ML (2022) Gill and Liver Transcript Expression Changes Associated With Gill Damage in Atlantic Salmon (Salmo salar). Frontiers in Immunology, 13, Art. No.: 806484. https://doi.org/10.3389/fimmu.2022.806484
Book Chapter
Caballero-Solares A, Hall JR, Xue X & Rise ML (2022) Reverse Transcription-Quantitative Real-Time Polymerase Chain Reaction (RT-qPCR) for Gene Expression Analyses. In: Christian SL (ed.) Cancer Cell Biology. Methods in Molecular Biology, 2508. Springer US, pp. 319-340. https://doi.org/10.1007/978-1-0716-2376-3_21
Book Chapter
Taylor RS, Daniels RR, Morata DP, Gundappa MK & Macqueen DJ (2022) Evolution of ray-finned fish genomes: Status and directions with a primer on microRNA characterization. In: Cellular and Molecular Approaches in Fish Biology. Amsterdam: Elsevier, pp. 309-346. https://doi.org/10.1016/b978-0-12-822273-7.00010-0
Article
Seafood in Food Security: A Call for Bridging the Terrestrial-Aquatic Divide
Stetkiewicz S, Norman RA, Allison EH, Coffee P, Crumlish M, Eltholth M, Falconer L, Kaminski AM, Leschen W, McAdam B, Newton R, Pounds A, Schapper A, Young JA & Little DC (2022) Seafood in Food Security: A Call for Bridging the Terrestrial-Aquatic Divide. Frontiers in Sustainable Food Systems, 5, Art. No.: 703152. https://doi.org/10.3389/fsufs.2021.703152
Article
Aquaculture will continue to depend more on land than sea
Zhang W, Belton B, Edwards P, Henriksson PJ, Little DC, Newton R & Troell M (2022) Aquaculture will continue to depend more on land than sea. Nature, 603, pp. E2-E4. https://doi.org/10.1038/s41586-021-04331-3
Article
The Complex Influences on How We Care for Farmed Fish
Turnbull JF (2022) The Complex Influences on How We Care for Farmed Fish. Frontiers in Veterinary Science, 8, Art. No.: 765797. https://doi.org/10.3389/fvets.2021.765797
Article
Chen X, He Z, Zhao J, Liao M, Xue Y, Zhou J, Hoare R, Monaghan SJ, Wang N, Pang H & Sun C (2022) Metagenomic Analysis of Bacterial Communities and Antibiotic Resistance Genes in Penaeus monodon Biofloc-Based Aquaculture Environments. Frontiers in Marine Science, 8, Art. No.: 762345. https://doi.org/10.3389/fmars.2021.762345
Article
Falconer L, Telfer TC, Garrett A, Hermansen Ø, Mikkelsen E, Hjøllo SS, McAdam BJ & Ytteborg E (2022) Insight into real-world complexities is required to enable effective response from the aquaculture sector to climate change. PLOS Climate, 1 (3), Art. No.: e0000017. https://doi.org/10.1371/journal.pclm.0000017
Article
Saito T, Whatmore P, Taylor JF, Fernandes JMO, Adam A, Tocher DR, Espe M & Skjaerven KH (2022) Micronutrient supplementation affects DNA methylation in male gonads with potential intergenerational epigenetic inheritance involving the embryonic development through glutamate receptor-associated genes. BMC Genomics, 23 (1), Art. No.: 115. https://doi.org/10.1186/s12864-022-08348-4
Article
Lambraki IA, Cousins M, Graells T, Leger A, Henriksson P, Harbarth S, Troell M, Wernli D, Jørgensen PS, Desbois AP, Carson CA, Parmley EJ & Majowicz SE (2022) Factors influencing antimicrobial resistance in the European food system and potential leverage points for intervention: A participatory, One Health study. PLoS ONE, 17 (2), Art. No.: e0263914. https://doi.org/10.1371/journal.pone.0263914
Article
Weidmann M, Graf E, Lichterfeld D, Abd El Wahed A & Bekaert M (2022) Efficient Screening of Long Oligonucleotides Against Hundred Thousands of SARS-CoV-2 Genome Sequences. Frontiers in Virology, 2, Art. No.: 835707. https://doi.org/10.3389/fviro.2022.835707
Article
Use of Poultry By-product and Plant Protein Sources in Diets of Redclaw (Cherax quadricarinatus)
Eroldogan OT, Elsabagh M, Sevgili H, Glencross B, Paolucci M, Kumlu M, Kinay E, Evliyaoglu E, Yilmaz HA & Sanibek M (2022) Use of Poultry By-product and Plant Protein Sources in Diets of Redclaw (Cherax quadricarinatus). Turkish Journal of Fisheries and Aquatic Sciences, 22 (8), Art. No.: TRJFAS21188. https://doi.org/10.4194/trjfas21188
Article
Shrivastav AK, Kumar G, Mittal P, Tocher DR, Glencross BD, Chakrabarti R & Sharma J (2022) Effect of Greater Duckweed Spirodela polyrhiza Supplemented Feed on Growth Performance, Digestive Enzymes, Amino and Fatty Acid Profiles, and Expression of Genes Involved in Fatty Acid Biosynthesis of Juvenile Common Carp Cyprinus carpio. Frontiers in Marine Science, 9, Art. No.: 788455. https://doi.org/10.3389/fmars.2022.788455
Article
Wang J, Pang H, Yin L, Zeng F, Wang N, Hoare R, Monaghan SJ, Li W & Jian J (2022) A Comprehensive Analysis of the Lysine Acetylome in the Aquatic Animals Pathogenic Bacterium Vibrio mimicus. Frontiers in Microbiology, 13, Art. No.: 816968. https://doi.org/10.3389/fmicb.2022.816968
Article
Chen S, Shi C, Migaud H, Song C, Mu C, Ye Y, Wang C & Ren Z (2022) Light Spectrum Impacts on Growth, Molting, and Oxidative Stress Response of the Mud Crab Scylla paramamosain. Frontiers in Marine Science, 9, Art. No.: 840353. https://doi.org/10.3389/fmars.2022.840353
Article
Elmagzoub WA, Idris SM, Isameldin M, Arabi N, Abdo A, Ibrahim M, Khan MAA, Tanneberger F, Bakhiet SM, Okuni JB, Ojok L, Gameel AA, Abd El Wahed A, Bekaert M & Mukhtar ME (2022) Mycobacterium avium subsp. paratuberculosis and microbiome profile of patients in a referral gastrointestinal diseases centre in the Sudan. PLoS ONE, 17 (4), Art. No.: e0266533. https://doi.org/10.1371/journal.pone.0266533
Article
Welfare in farmed decapod crustaceans, with particular reference to Penaeus vannamei
Albalat A, Zacarias S, Coates CJ, Neil DM & Rey Planellas S (2022) Welfare in farmed decapod crustaceans, with particular reference to Penaeus vannamei. Frontiers in Marine Science, 9, Art. No.: 886024. https://doi.org/10.3389/fmars.2022.886024
Article
Goswami RK, Sharma J, Shrivastav AK, Kumar G, Glencross BD, Tocher DR & Chakrabarti R (2022) Effect of Lemna minor supplemented diets on growth, digestive physiology and expression of fatty acids biosynthesis genes of Cyprinus carpio. Scientific Reports, 12, Art. No.: 3711. https://doi.org/10.1038/s41598-022-07743-x
Article
Evidence of multiple genome duplication events in Mytilus evolution
Corrochano-Fraile A, Davie A, Carboni S & Bekaert M (2022) Evidence of multiple genome duplication events in Mytilus evolution. BMC Genomics, 23 (1), Art. No.: 340. https://doi.org/10.1186/s12864-022-08575-9
Article
Murray FJ & Little DC (2022) Rural Consumer Preferences for Inland Fish and Their Substitutes in the Dry-Zone of Sri Lanka and Implications for Aquaculture Development. Frontiers in Sustainable Food Systems, 6, Art. No.: 867701. https://doi.org/10.3389/fsufs.2022.867701
Research Report
Climate change impacts on marine aquaculture relevant to the UK and Ireland
Murray A, Falconer L, Clarke D & Kennerley A (2022) Climate change impacts on marine aquaculture relevant to the UK and Ireland. UK Marine Climate Change Impacts Partnership (MCCIP). https://www.mccip.org.uk/aquaculture. https://doi.org/10.14465/2022.reu01.aqu
Article
Macchia V, Inami M, Ramstad A, Grammes F, Reeve A, Moen T, Torgersen JS, Adams A, Desbois AP & Hoare R (2022) Immersion challenge model for Flavobacterium psychrophilum infection of Atlantic salmon (Salmo salar L.) fry. Journal of Fish Diseases, 45 (11), pp. 1781-1788. https://doi.org/10.1111/jfd.13699
Article
Payne C, Turnbull J, MacKenzie S & Crumlish M (2022) The effect of oxytetracycline treatment on the gut microbiome community dynamics in rainbow trout (Oncorhynchus mykiss) over time. Aquaculture, 560, Art. No.: 738559. https://doi.org/10.1016/j.aquaculture.2022.738559
Article
Mountford J, Gheyas A, Vervelde L & Smith J (2022) Genetic variation in chicken interferon signalling pathway genes in research lines showing differential viral resistance. Animal Genetics, 53 (5), pp. 640-656. https://doi.org/10.1111/age.13233
Article
Fernandez-Senac C, Monaghan SJ, Mascolo D, Baily JL, Betancor M, Chalmers L, Paladini G, Adams A, Fridman S & Bron JE (2022) Investigating the impacts of H(2)O(2) treatment on gills of healthy Atlantic salmon reveals potential changes to mucus production with implications on immune activity. Fish and Shellfish Immunology, 128, pp. 74-81. https://doi.org/10.1016/j.fsi.2022.06.063
Article
Monitoring of Plastic Islands in River Environment Using Sentinel-1 SAR Data
Simpson MD, Marino A, de Maagt P, Gandini E, Hunter P, Spyrakos E, Tyler A & Telfer T (2022) Monitoring of Plastic Islands in River Environment Using Sentinel-1 SAR Data. Remote Sensing, 14 (18), Art. No.: 4473. https://doi.org/10.3390/rs14184473
Article
Broughton R, Tocher DR, Napier JA & Betancor MB (2022) Profiling Phospholipids within Atlantic Salmon Salmo salar with Regards to a Novel Terrestrial Omega-3 Oil Source. Metabolites, 12 (9), Art. No.: 851. https://doi.org/10.3390/metabo12090851
Article
Nutritional immunomodulation of Atlantic salmon response to Renibacterium salmoninarum bacterin
Emam M, Eslamloo K, Caballero-Solares A, Lorenz EK, Xue X, Umasuthan N, Gnanagobal H, Santander J, Taylor RG, Balder R, Parrish CC & Rise ML (2022) Nutritional immunomodulation of Atlantic salmon response to Renibacterium salmoninarum bacterin. Frontiers in Molecular Biosciences, 9. https://doi.org/10.3389/fmolb.2022.931548
Article
Cutajar K, Falconer L, Massa-Gallucci A, Cox RE, Schenke L, Bardócz T, Andolina C, Signa G, Vizzini S, Sprague M & Telfer TC (2022) Stable isotope and fatty acid analysis reveal the ability of sea cucumbers to use fish farm waste in integrated multi-trophic aquaculture. Journal of Environmental Management, 318, Art. No.: 115511. https://doi.org/10.1016/j.jenvman.2022.115511
Article
Lorgen-Ritchie M, Clarkson M, Chalmers L, Taylor JF, Migaud H & Martin SAM (2022) Temporal changes in skin and gill microbiomes of Atlantic salmon in a recirculating aquaculture system – Why do they matter?. Aquaculture, 558, Art. No.: 738352. https://doi.org/10.1016/j.aquaculture.2022.738352
Article
Aboal M, Belando M, Ubero N, González-Silvera D & López-Jiménez J (2022) Photoautotrophs and macroinvertebrate trophic relations in calcareous semiarid streams: The role of Cyanobacteria. Science of The Total Environment, 838 (Part 3), Art. No.: 156206. https://doi.org/10.1016/j.scitotenv.2022.156206
Article
Herrero A, Rodger H, Hayward AD, Cousens C, Bron JE, Dagleish MP & Thompson KD (2022) Prospective Longitudinal Study of Putative Agents Involved in Complex Gill Disorder in Atlantic salmon (Salmo salar). Pathogens, 11 (8), Art. No.: 878. https://doi.org/10.3390/pathogens11080878
Article
Wehry GJE, Little DC, Newton RW & Bostock JC (2022) The feasibility of underutilised biomass streams for the production of insect-based feed ingredients: The case for whisky by-products and Scottish farmed salmon. Cleaner Engineering and Technology, 9, Art. No.: 100520. https://doi.org/10.1016/j.clet.2022.100520
Article
Albalat A, Gornik S, Muangnapoh C & Neil DM (2022) Effectiveness and quality evaluation of electrical stunning versus chilling in Norway lobsters (Nephrops norvegicus). Food Control, 138, Art. No.: 108930. https://doi.org/10.1016/j.foodcont.2022.108930
Article
Bostock J, Albalat A, Bunting S, Turner WA, Mensah AD & Little DC (2022) Mixed-sex Nile tilapia (Oreochromis niloticus) can perform competitively with mono-sex stocks in cage production. Aquaculture, 557, Art. No.: 738315. https://doi.org/10.1016/j.aquaculture.2022.738315
Article
Pountney SM, Lein I, Selly SC, Migaud H & Davie A (2022) Comparative proximate analysis of wild and captive lumpfish (Cyclopterus lumpus) eggs show deficiencies in captive eggs and possible egg quality determinants. Aquaculture, 557, Art. No.: 738356. https://doi.org/10.1016/j.aquaculture.2022.738356
Article
Taggart JB, Leaver MJ & Bekaert M (2022) DNA polymorphism underlying allozyme variation at a malic enzyme locus (mMEP-2*) in Atlantic salmon (Salmo salar L.). Journal of Fish Biology. https://doi.org/10.1111/jfb.15182
Article
Saleh R, Betancor M, Mohamed A, El-Sayed Ali T & Izquierdo M (2022) Different phosphatidylcholine and n-3 HUFA contents in microdiets for gilthead seabream (Sparus aurata) larvae: effects on histological changes in intestine and liver. Aquaculture International. https://doi.org/10.1007/s10499-022-00935-2
Article
Taylor RS, Ruiz Daniels R, Dobie R, Naseer S, Clark TC, Henderson NC, Boudinot P, Martin SAM & Macqueen DJ (2022) Single cell transcriptomics of Atlantic salmon (Salmo salar L.) liver reveals cellular heterogeneity and immunological responses to challenge by Aeromonas salmonicida. Frontiers in Immunology, 13. https://doi.org/10.3389/fimmu.2022.984799
Article
Fourth Report on Chicken Genes and Chromosomes 2022
Smith J, Alfieri JM, Anthony N, Arensburger P, Athrey GN, Balacco J, Balic A, Bardou P, Barela P, Bigot Y, Blackmon H, Borodin PM, Carroll R, Casono MC & Gheyas AA (2022) Fourth Report on Chicken Genes and Chromosomes 2022. Cytogenetic and Genome Research, 162 (8-9), pp. 405-528. https://doi.org/10.1159/000529376
Article
Understanding Vaccine Hesitancy in Vietnamese Fish Farmers
Chambers JA, Crumlish M, Comerford DA, Phuoc L, Phuong V & O’Carroll RE (2022) Understanding Vaccine Hesitancy in Vietnamese Fish Farmers. Antibiotics, 11 (7), Art. No.: 878. https://doi.org/10.3390/antibiotics11070878
Article
Boutarfa S, Senoussi MM, González-Silvera D, López-Jiménez JÁ & Aboal M (2022) Fatty acids profile of Mastigocladus laminosus Cohn ex Kichner isolated from Algerian hot springs as a biofuel feedstock. Gonzalez Silvera D (Researcher) Biocatalysis and Agricultural Biotechnology, 42, Art. No.: 102373. https://doi.org/10.1016/j.bcab.2022.102373
Article
Houston SJS, Karalazos V, Tinsley J, Tocher DR, Glencross BD & Monroig Ó (2022) A comparison of regression models for defining EPA + DHA requirements using the gilthead seabream (Sparus aurata) as a model species. Aquaculture, 556, Art. No.: 738308. https://doi.org/10.1016/j.aquaculture.2022.738308
Article
Elbialy ZI, Gamal S, Al-Hawary II, Shukry M, Salah AS, Aboshosha AA & Assar DH (2022) Exploring the impacts of different fasting and refeeding regimes on Nile tilapia (Oreochromis niloticus L.): growth performance, histopathological study, and expression levels of some muscle growth-related genes. Fish Physiology and Biochemistry. https://doi.org/10.1007/s10695-022-01094-0
Article
The vital roles of blue foods in the global food system
Tigchelaar M, Leape J, Micheli F, Allison EH, Basurto X, Bennett A, Bush SR, Cao L, Cheung WWL, Crona B, DeClerck F, Fanzo J, Gelcich S, Gephart JA & Little DC (2022) The vital roles of blue foods in the global food system. Global Food Security, 33, Art. No.: 100637. https://doi.org/10.1016/j.gfs.2022.100637
Article
Watkins CA, Gaines T, Strathdee F, Baily JL, Watson E, Hall AJ, Free A & Dagleish MP (2022) A comparative study of the fecal microbiota of gray seal pups and yearlings ‐ a marine mammal sentinel species. MicrobiologyOpen, 11 (3), Art. No.: e1281. https://doi.org/10.1002/mbo3.1281
Article
Edwardsiella ictaluri: A systemic review and future perspectives on disease management
Machimbirike VI, Crumlish M, Dong HT, Santander J, Khunrae P & Rattanarojpong T (2022) Edwardsiella ictaluri: A systemic review and future perspectives on disease management. Reviews in Aquaculture, 14 (3), pp. 1613-1636. https://doi.org/10.1111/raq.12665
Article
Prentice PM, Mnatzaganian C, Houslay TM, Thornton A & Wilson AJ (2022) Individual differences in spatial learning are correlated across tasks but not with stress response behaviour in guppies. Animal Behaviour, 188, pp. 133-146. https://doi.org/10.1016/j.anbehav.2022.04.009
Article
Cui W, Takahashi E, Morro B, Balseiro P, Albalat A, Pedrosa C, Mackenzie S, Nilsen TO, Sveier H, Ebbesson LO, Handeland SO & Shimizu M (2022) Changes in circulating insulin-like growth factor-1 and its binding proteins in yearling rainbow trout during spring under natural and manipulated photoperiods and their relationships with gill Na+, K+-ATPase and body size. Comparative Biochemistry and Physiology Part A: Molecular and Integrative Physiology, 268, Art. No.: 111205. https://doi.org/10.1016/j.cbpa.2022.111205