Conference Paper (published)
The Lab Disk - A Fully Automated Centrifugal Lab-on-a-Chip System for the Detection of Biological Threats
van Oordt T, Strohmeier O, Mark D, Zengerle R, Eberhard M, Drexler J, Patel P, Weidmann M, Zgaga-Griesz A, Bessler WG & von Stetten F (2012) The Lab Disk - A Fully Automated Centrifugal Lab-on-a-Chip System for the Detection of Biological Threats. In: Aschenbruck N, Martini P, Meier M & Tolle J (eds.) Future Security: 7th Security Research Conference, Future Security 2012, Bonn, Germany, September 4-6, 2012. Proceedings. Communications in Computer and Information Science, 318. 7th Security Research Conference, Future Security 2012, Bonn, Germany, 04.09.2012-06.09.2012. Berlin Heidelberg: Springer, pp. 220-223. http://link.springer.com/chapter/10.1007%2F978-3-642-33161-9_33; https://doi.org/10.1007/978-3-642-33161-9_33
Article
Genetic characterization of Erve virus, a European Nairovirus distantly related to Crimean-Congo hemorrhagic fever virus
Dilcher M, Koch A, Hasib L, Dobler G, Hufert FT & Weidmann M (2012) Genetic characterization of Erve virus, a European Nairovirus distantly related to Crimean-Congo hemorrhagic fever virus. Virus Genes, 45 (3), pp. 426-432. https://doi.org/10.1007/s11262-012-0796-8
Conference Paper (published)
Automated and miniaturized detection of biological threats with a centrifugal microfluidic system
Mark D, van Oordt T, Strohmeier O, Roth G, Drexler J, Eberhard M, Niedrig M, Patel P, Zgaga-Griesz A, Bessler WG, Weidmann M, Hufert FT, Zengerle R & von Stetten F (2012) Automated and miniaturized detection of biological threats with a centrifugal microfluidic system. In: Cullum B & McLamore E (eds.) Smart Biomedical and Physiological Sensor Technology IX. Proceedings of SPIE, 8367. Smart Biomedical and Physiological Sensor Technology IX, Baltimore, MD, USA, 23.04.2012-23.04.2012. SPIE, p. 83670E. http://spie.org/x648.html?product_id=902831; https://doi.org/10.1117/12.919933
Article
A phaseguided passive batch microfluidic mixing chamber for isothermal amplification
Hakenberg S, Hugle M, Weidmann M, Hufert FT, Dame G & Urban GA (2012) A phaseguided passive batch microfluidic mixing chamber for isothermal amplification. Lab on a Chip, 12 (21), pp. 4576-4580. https://doi.org/10.1039/c2lc40765e
Article
Advanced Yellow Fever Virus Genome Detection in Point-of-Care Facilities and Reference Laboratories
Domingo C, Patel P, Yillah J, Weidmann M, Mendez JA, Nakoune ER & Niedrig M (2012) Advanced Yellow Fever Virus Genome Detection in Point-of-Care Facilities and Reference Laboratories. Journal of Clinical Microbiology, 50 (12), pp. 4054-4060. https://doi.org/10.1128/JCM.01799-12
Conference Paper (unpublished)
Simulating observed heterozygosity to test hypotheses about small scale spatial structure in a marine fish stock
McAdam BJ, Pardoe H & Marteinsdottir G (2012) Simulating observed heterozygosity to test hypotheses about small scale spatial structure in a marine fish stock. 6th World Fisheries Congress, Edinburgh, UK, 07.05.2012-11.05.2012.
Conference Paper (unpublished)
Phenotypic markers of intra-stock diversity in Atlantic cod in Icelandic waters
Pardoe H, McAdam BJ & Marteinsdottir G (2012) Phenotypic markers of intra-stock diversity in Atlantic cod in Icelandic waters. 6th World Fisheries Congress, Edinburgh, UK, 07.05.2012-11.05.2012.
Article
Modeling the economic impact of welfare interventions in fish farming—A case study from the UK rainbow trout industry
Kankainen M, Berrill I, Noble C, Ruohonen K, Setala J, Kole APW, Mejdell CM, Kadri S & Turnbull J (2012) Modeling the economic impact of welfare interventions in fish farming—A case study from the UK rainbow trout industry. Aquaculture Economics and Management, 16 (4), pp. 315-340. https://doi.org/10.1080/13657305.2012.729248
Article
A multi-disciplinary framework for bio-economic modeling in aquaculture: a welfare case study
Noble C, Berrill I, Waller B, Kankainen M, Setala J, Honkanen P, Mejdell CM, Turnbull J, Damsgard B, Schneider O, Toften H, Kole APW & Kadri S (2012) A multi-disciplinary framework for bio-economic modeling in aquaculture: a welfare case study. Aquaculture Economics and Management, 16 (4), pp. 297-314. https://doi.org/10.1080/13657305.2012.729250
Article
Bio-economic costs and benefits of using triploid rainbow trout in aquaculture: Reduced mortality
Berrill I, MacIntyre C, Noble C, Kankainen M & Turnbull J (2012) Bio-economic costs and benefits of using triploid rainbow trout in aquaculture: Reduced mortality. Aquaculture Economics and Management, 16 (4), pp. 365-383. https://doi.org/10.1080/13657305.2012.729245
Article
Welfare and aquaculture: Where BENEFISH fits in
Turnbull J & Huntingford FA (2012) Welfare and aquaculture: Where BENEFISH fits in. Aquaculture Economics and Management, 16 (4), pp. 433-440. https://doi.org/10.1080/13657305.2012.729249
Article
Impact of Daily Thermocycles on Hatching Rhythms, Larval Performance and Sex Differentiation of Zebrafish
Villamizar N, Ribas L, Piferrer F, Vera L & Sanchez-Vazquez FJ (2012) Impact of Daily Thermocycles on Hatching Rhythms, Larval Performance and Sex Differentiation of Zebrafish. PLoS ONE, 7 (12), Art. No.: e52153. https://doi.org/10.1371/journal.pone.0052153
Article
An evaluation of trace metal distribution, enrichment factors and risk in sediments of a coastal lagoon (Ria de Aveiro, Portugal)
Pastorinho MR, Telfer T, Nogueira AJA, Soares AMVM & Ranville JF (2012) An evaluation of trace metal distribution, enrichment factors and risk in sediments of a coastal lagoon (Ria de Aveiro, Portugal). Environmental Earth Sciences, 67 (7), pp. 2043-2052. https://doi.org/10.1007/s12665-012-1643-x
Book Chapter
Rapid diagnostics for resource-poor settings
Weidmann M & Hufert FT (2012) Rapid diagnostics for resource-poor settings. In: Kappas M, Gross U & Kelleher D (eds.) Global Health: A challenge for interdisciplinary research. Göttingen, Germany: Universitätsverlag Göttingen, pp. 233-243. http://www.oapen.org/search?identifier=441522
Article
Bagres invasores ¿Amenaza u oportunidad?
Ramirez Suarez JC, Martinez-Palacios CA, Pacheco Aguilar R, Ross L, Arreguin Sanchez F, Campos-Mendoza A, Diaz Pardo E, Fonseca-Madrigal J, Gutierrez Hernandez A, Rios-Duran MG, Rueda Jasso R, Toledo Cuevas M, Salas Razo G & Shimada A (2012) Bagres invasores ¿Amenaza u oportunidad?. INFOPESCA Internacional, (50), pp. 25-28. http://www.infopesca.org/node/716
Book Chapter
Quality assurance in aquatic disease diagnostics
Crumlish M (2012) Quality assurance in aquatic disease diagnostics. In: Austin B (ed.) Infectious disease in aquaculture: Prevention and Control. Oxford: Woodhead Publishing, pp. 147-159. http://store.elsevier.com/Infectious-Disease-in-Aquaculture/isbn-9780857090164/
Book Chapter
Developments in genomics relevant to disease control in aquaculture
MacKenzie S, Boltana S, Novoa B, Figueras A & Goetz FW (2012) Developments in genomics relevant to disease control in aquaculture. In: Austin B (ed.) Infectious Disease in Aquaculture: Prevention and Control. Woodhead Publishing Series in Food Science, Technology and Nutrition, 231. Cambridge: Woodhead Printing, pp. 331-352. http://www.sciencedirect.com/science/article/pii/B9780857090164500131; https://doi.org/10.1533/9780857095732.3.331
Article
Evaluating abnormal mortality as an indicator of disease presence in the Atlantic salmon industry using the receiver operating characteristic (ROC)
Soares S, Murray AG, Crumlish M, Turnbull J & Green D (2012) Evaluating abnormal mortality as an indicator of disease presence in the Atlantic salmon industry using the receiver operating characteristic (ROC). Aquaculture, 370-371, pp. 136-143. https://doi.org/10.1016/j.aquaculture.2012.10.004
Article
Molecular cloning, tissue distribution and daily expression of cry1 and cry2 clock genes in European seabass (Dicentrarchus labrax)
Del Pozo A, Vera L, Sanchez JA & Sanchez-Vazquez FJ (2012) Molecular cloning, tissue distribution and daily expression of cry1 and cry2 clock genes in European seabass (Dicentrarchus labrax). Comparative Biochemistry and Physiology Part A: Molecular and Integrative Physiology, 163 (3-4), pp. 364-371. https://doi.org/10.1016/j.cbpa.2012.07.004
Article
Separability indexes and accuracy of neuro-fuzzy classification in Geographic Information Systems for assessment of coastal environmental vulnerability
Moreno Navas J, Telfer T & Ross L (2012) Separability indexes and accuracy of neuro-fuzzy classification in Geographic Information Systems for assessment of coastal environmental vulnerability. Ecological Informatics, 12, pp. 43-49. https://doi.org/10.1016/j.ecoinf.2012.06.006
Article
Recirculating Aquaculture Systems (RAS) analysis: main issues on management and future challenges
Badiola M, Mendiola D & Bostock J (2012) Recirculating Aquaculture Systems (RAS) analysis: main issues on management and future challenges. Aquacultural Engineering, 51, pp. 26-35. https://doi.org/10.1016/j.aquaeng.2012.07.004
Article
Stocking methods and parasite-induced reductions in capture: Modelling Argulus foliaceus in trout fisheries
McPherson N, Norman R, Hoyle A, Bron J & Taylor NGH (2012) Stocking methods and parasite-induced reductions in capture: Modelling Argulus foliaceus in trout fisheries. Journal of Theoretical Biology, 312, pp. 22-33. https://doi.org/10.1016/j.jtbi.2012.07.017
Article
Innate immune defence mechanisms of tench, Tinca tinca (L.), naturally infected with the tapeworm Monobothrium wageneri
Dezfuli BS, Lui A, Giari L, Castaldelli G, Shinn A & Lorenzoni M (2012) Innate immune defence mechanisms of tench, Tinca tinca (L.), naturally infected with the tapeworm Monobothrium wageneri. Parasite Immunology, 34 (11), pp. 511-519. https://doi.org/10.1111/j.1365-3024.2012.01373.x
Article
Reconstruction of Danio rerio Metabolic Model Accounting for Subcellular Compartmentalisation
Bekaert M (2012) Reconstruction of Danio rerio Metabolic Model Accounting for Subcellular Compartmentalisation. PLoS ONE, 7 (11), p. e49903. https://doi.org/10.1371/journal.pone.0049903
Article
Functional feeds reduce heart inflammation and pathology in Atlantic salmon (Salmo salar L.) following experimental challenge with Atlantic salmon reovirus (ASRV)
Martinez-Rubio L, Morais S, Evensen O, Wadsworth S, Ruohonen K, Vecino JLG, Bell JG & Tocher DR (2012) Functional feeds reduce heart inflammation and pathology in Atlantic salmon (Salmo salar L.) following experimental challenge with Atlantic salmon reovirus (ASRV). PLoS ONE, 7 (11), Art. No.: e40266. https://doi.org/10.1371/journal.pone.0040266
Article
Ultrastructural morphogenesis of salmonid alphavirus 1
Herath T, Ferguson H, Thompson K, Adams A & Richards R (2012) Ultrastructural morphogenesis of salmonid alphavirus 1. Journal of Fish Diseases, 35 (11), pp. 799-808. https://doi.org/10.1111/j.1365-2761.2012.01420.x
Article
Draft genome sequence of a nonhemolytic fish-pathogenic streptococcus agalactiae strain
Delannoy CMJ, Zadoks RN, Lainson FA, Ferguson H, Crumlish M, Turnbull J & Fontaine MC (2012) Draft genome sequence of a nonhemolytic fish-pathogenic streptococcus agalactiae strain. Journal of Bacteriology, 194 (22), pp. 6341-6342. https://doi.org/10.1128/JB.01552-12
Article
Metabolic and evolutionary costs of herbivory defense: systems biology of glucosinolate synthesis
Bekaert M, Edger PP, Hudson CM, Pires JC & Conant GC (2012) Metabolic and evolutionary costs of herbivory defense: systems biology of glucosinolate synthesis. New Phytologist, 196 (2), pp. 596-605. https://doi.org/10.1111/j.1469-8137.2012.04302.x
Article
Identification of stock components using morphological markers
McAdam BJ, Grabowski TB & Marteinsdottir G (2012) Identification of stock components using morphological markers. Journal of Fish Biology, 81 (5), pp. 1447-1462. https://doi.org/10.1111/j.1095-8649.2012.03384.x
Article
Genetic characterization of Bhanja virus and Palma virus, two tick-borne phleboviruses
Dilcher M, Alves MJ, Finkeisen D, Hufert FT & Weidmann M (2012) Genetic characterization of Bhanja virus and Palma virus, two tick-borne phleboviruses. Virus Genes, 45 (2), pp. 311-315. https://doi.org/10.1007/s11262-012-0785-y
Article
Visualisation of the copepod female reproductive system using confocal laser scanning microscopy and two-photon microscopy
Fitzer S, Bishop JDD, Caldwell GS, Clare AS, Upstill-Goddard RC & Bentley MG (2012) Visualisation of the copepod female reproductive system using confocal laser scanning microscopy and two-photon microscopy. Journal of Crustacean Biology, 32 (5), pp. 685-692. https://doi.org/10.1163/193724012X639788
Article
Crab culture potential in southwestern Bangladesh: alternative to shrimp culture for climate change adaption
Salam MA, Islam SMM, Gan J & Ross L (2012) Crab culture potential in southwestern Bangladesh: alternative to shrimp culture for climate change adaption. International Research Journal of Applied Life Sciences, 1 (4), pp. 15-31. http://www.setscholars.org/index.php/irjals/article/view/256/134
Article
Abundance of myostatin gene transcripts and their correlation with muscle hypertrophy during the development of barramundi, Lates calcarifer
De Santis C, Gomes GB & Jerry DR (2012) Abundance of myostatin gene transcripts and their correlation with muscle hypertrophy during the development of barramundi, Lates calcarifer. Comparative Biochemistry and Physiology - Part B: Biochemistry and Molecular Biology, 163 (1), pp. 101-107. https://doi.org/10.1016/j.cbpb.2012.05.008
Article
Testing for differences in spatial distributions from individual based data
McAdam BJ, Grabowski TB & Marteinsdottir G (2012) Testing for differences in spatial distributions from individual based data. Fisheries Research, 127-128, pp. 148-153. https://doi.org/10.1016/j.fishres.2012.02.024
Article
The Impact of Escaped Farmed Atlantic Salmon (Salmo salar L.) on Catch Statistics in Scotland
Green D, Penman D, Migaud H, Bron J, Taggart J & McAndrew B (2012) The Impact of Escaped Farmed Atlantic Salmon (Salmo salar L.) on Catch Statistics in Scotland. PLoS ONE, 7 (9), p. e43560. https://doi.org/10.1371/journal.pone.0043560
Article
Intraspecific diversity of Edwardsiella ictaluri isolates from diseased freshwater catfish, Pangasianodon hypophthalmus (Sauvage), cultured in the Mekong Delta, Vietnam
Bartie K, Austin FW, Diab A, Dickson C, Dung TT, Giacomini M & Crumlish M (2012) Intraspecific diversity of Edwardsiella ictaluri isolates from diseased freshwater catfish, Pangasianodon hypophthalmus (Sauvage), cultured in the Mekong Delta, Vietnam. Journal of Fish Diseases, 35 (9), pp. 671-682. https://doi.org/10.1111/j.1365-2761.2012.01376.x
Article
Seasonal development and pathological changes associated with the parasitic nematode Philometroides sanguineus in wild crucian carp Carassius carassius (L.) in England
Williams CF, Moravec F, Turnbull J & Ferguson H (2012) Seasonal development and pathological changes associated with the parasitic nematode Philometroides sanguineus in wild crucian carp Carassius carassius (L.) in England. Journal of Helminthology, 86 (3), pp. 329-338. https://doi.org/10.1017/S0022149X11000356
Article
Recovery of Aeromonas hydrophila associated with bacteraemia in captive snakes
Orozova P, Sirakov I, Petkov I, Crumlish M & Austin B (2012) Recovery of Aeromonas hydrophila associated with bacteraemia in captive snakes. FEMS Microbiology Letters, 334 (1), pp. 22-26. https://doi.org/10.1111/j.1574-6968.2012.02613.x
Article
Biosynthesis of essential fatty acids in Octopus vulgaris (Cuvier, 1797): Molecular cloning, functional characterisation and tissue distribution of a fatty acyl elongase
Monroig O, Guinot D, Hontoria F, Tocher DR & Navarro JC (2012) Biosynthesis of essential fatty acids in Octopus vulgaris (Cuvier, 1797): Molecular cloning, functional characterisation and tissue distribution of a fatty acyl elongase. Aquaculture, 360-361, pp. 45-53. https://doi.org/10.1016/j.aquaculture.2012.07.016
Article
Effects of genotype and dietary fish oil replacement with vegetable oil on the intestinal transcriptome and proteome of Atlantic salmon (Salmo salar)
Morais S, Silva T, Cordeiro O, Rodrigues P, Guy DR, Bron J, Taggart J, Bell JG & Tocher DR (2012) Effects of genotype and dietary fish oil replacement with vegetable oil on the intestinal transcriptome and proteome of Atlantic salmon (Salmo salar). BMC Genomics, 13, Art. No.: 448. https://doi.org/10.1186/1471-2164-13-448
Article
Photoperiod effects on the expression of kisspeptin and gonadotropin genes in Atlantic cod, Gadus morhua, during first maturation
Cowan M, Davie A & Migaud H (2012) Photoperiod effects on the expression of kisspeptin and gonadotropin genes in Atlantic cod, Gadus morhua, during first maturation. Comparative Biochemistry and Physiology Part A: Molecular and Integrative Physiology, 163 (1), pp. 82-94. https://doi.org/10.1016/j.cbpa.2012.05.191
Article
Age-related changes in mitochondrial membrane composition of rainbow trout (Oncorhynchus mykiss) heart and brain
Almaida P, de Costa J, Mendiola P & Tocher DR (2012) Age-related changes in mitochondrial membrane composition of rainbow trout (Oncorhynchus mykiss) heart and brain. Comparative Biochemistry and Physiology - Part B: Biochemistry and Molecular Biology, 163 (1), pp. 129-137. https://doi.org/10.1016/j.cbpb.2012.05.013
Article
The concept of integrated national maritime policy and its application to Saudi Arabia
Al-Bisher H, Gray T & Stead SM (2012) The concept of integrated national maritime policy and its application to Saudi Arabia. Maritime Policy and Management, 39 (5), pp. 525-541. https://doi.org/10.1080/03088839.2012.705031
Conference Abstract
A Functional Blister-Pack LabDisk System for Point of Care Testing
van Oordt T, Strohmeier O, Mark D, Kosse D, Roth G, Achazi K, Patel P, Linke S, Paust N, Weidmann M, Drexler J, Hufert FT, Zengerle R, Eberhard M, Niedrig M & von Stetten F (2012) A Functional Blister-Pack LabDisk System for Point of Care Testing. Jahrestagung der Deutschen Gesellschaft fur Hygiene und Mikrobiologie (DGHM)/64th Annual Meeting of the German Society for Hygiene and Microbiology (DGHM), Hamburg, Germany, 30/09/2012 - 03/10/2012. International Journal of Medical Microbiology, 302 (Supplement 1), pp. 7-7. https://doi.org/10.1016/j.ijmm.2012.08.001
Conference Abstract
Isolation and functional characterisation of a stearoyl-CoA desaturase from the marine invertebrate Octopus vulgaris
Monroig O, Varo I, Tocher DR & Navarro JC (2012) Isolation and functional characterisation of a stearoyl-CoA desaturase from the marine invertebrate Octopus vulgaris. Comparative Biochemistry and Physiology Part A: Molecular and Integrative Physiology, 163 (1), pp. S46-S47. https://doi.org/10.1016/j.cbpa.2012.05.139
Article
Teleost fish larvae adapt to dietary arachidonic acid supply through modulation of the expression of lipid metabolism and stress response genes
Martins DA, Rocha F, Martinez-Rodriguez G, Bell JG, Morais S, Castanheira F, Bandarra N, Coutinho J, Yufera M & Conceicao LEC (2012) Teleost fish larvae adapt to dietary arachidonic acid supply through modulation of the expression of lipid metabolism and stress response genes. British Journal of Nutrition, 108 (5), pp. 864-874. https://doi.org/10.1017/S0007114511006143
Article
Proliferative cell nuclear antigen (PCNA) expression in the intestine of Salmo trutta trutta naturally infected with an acanthocephalan
Dezfuli BS, Giari L, Lui A, Squerzanti S, Castaldelli G, Shinn A, Manera M & Lorenzoni M (2012) Proliferative cell nuclear antigen (PCNA) expression in the intestine of Salmo trutta trutta naturally infected with an acanthocephalan. Parasites and Vectors, 5 (1), Art. No.: 198. https://doi.org/10.1186/1756-3305-5-198
Article
No-trawl area impacts: Perceptions, compliance and fish abundances
Bloomfield HJ, Sweeting CJ, Mill AC, Stead SM & Polunin NVC (2012) No-trawl area impacts: Perceptions, compliance and fish abundances. Environmental Conservation, 39 (3), pp. 237-247. https://doi.org/10.1017/S0376892912000112
Article
Genetic mapping of quantitative trait loci (QTL) for body-weight in Atlantic salmon (Salmo salar) using a 6.5K SNP array
Gutierrez AP, Lubieniecki KP, Davidson EA, Lien S, Kent MP, Fukui S, Withler RE, Swift B & Davidson WS (2012) Genetic mapping of quantitative trait loci (QTL) for body-weight in Atlantic salmon (Salmo salar) using a 6.5K SNP array. Aquaculture, 358-359, pp. 61-70. https://doi.org/10.1016/j.aquaculture.2012.06.017
Article
Hepatic transcriptome analysis of inter-family variability in flesh n-3 long-chain polyunsaturated fatty acid content in Atlantic salmon
Morais S, Taggart J, Guy DR, Bell JG & Tocher DR (2012) Hepatic transcriptome analysis of inter-family variability in flesh n-3 long-chain polyunsaturated fatty acid content in Atlantic salmon. BMC Genomics, 13, Art. No.: 410. https://doi.org/10.1186/1471-2164-13-410
Article
Selective Pressure of Antibiotic Pollution on Bacteria of Importance to Public Health
Tello A, Austin B & Telfer T (2012) Selective Pressure of Antibiotic Pollution on Bacteria of Importance to Public Health. Environmental Health Perspectives, 120 (8), pp. 1100-1106. https://doi.org/10.1289/ehp.1104650
Article
Recombinase polymerase amplification assay for rapid detection of Rift Valley fever virus
Euler M, Wang Y, Nentwich O, Piepenburg O, Hufert FT & Weidmann M (2012) Recombinase polymerase amplification assay for rapid detection of Rift Valley fever virus. Journal of Clinical Virology, 54 (4), pp. 308-312. https://doi.org/10.1016/j.jcv.2012.05.006
Research Report
Evaluation Of Sensitivity To Chemotherapeutants In Successive Generations Of Lepeoptheirus Salmonis From A Resistant Population
Tildesley A, Boyd S, Matthew C, Barnett S, Bassett DI, Cowan M & Roy W (2012) Evaluation Of Sensitivity To Chemotherapeutants In Successive Generations Of Lepeoptheirus Salmonis From A Resistant Population. Scottish Aquaculture Research Forum Report 069 (Editor) Scottish Aquaculture Research Forum. Scottish Aquaculture Research Forum Reports, 069. Scottish Aquaculture Research Forum. http://www.sarf.org.uk/cms-assets/documents/72452-592533.sarf069.pdf
